PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G424000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 100aa    MW: 11082.7 Da    PI: 6.5112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G424000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.6e-0543643455
                        TTS-STCHHHHHHHHHHHHHHH CS
                 HLH 34 pskKlsKaeiLekAveYIksLq 55
                        +++K++ +++Le+Av+Y+k Lq
  Prupe.1G424000.1.p 43 NGTKVDLSTMLEEAVDYVKFLQ 64
                        5699*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-63872IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-73879IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.77E-53868No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
MEGELQTTKH HHQPALNFHG KARTSRAAAT DPESLYARNL VPNGTKVDLS TMLEEAVDYV  60
KFLQLQIKLL SSDDTWMYAP IAYIGMDIGL NLQKISPLL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226322.13e-52hypothetical protein PRUPE_ppa022224mg, partial
SwissprotQ7XHI97e-39BH084_ARATH; Transcription factor bHLH84
TrEMBLM5XPT03e-52M5XPT0_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_18s0001g09210.t012e-37(Vitis vinifera)
STRINGBra011476.1-P4e-37(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-40bHLH family protein